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Revision as of 18:40, 20 April 2010 (edit) Nitinkumar (Talk | contribs) (New page: {{immunebox | Name =<b>Cell division protein FtsQ </b> |image= | width=250 |image2= |Swiss Prot = P64168 | Genbank = 888367 | PDB = | DrugBank ...) ← Previous diff

Current revision (18:40, 20 April 2010) (edit) (undo) Nitinkumar (Talk | contribs) (New page: {{immunebox | Name =<b>Cell division protein FtsQ </b> |image= | width=250 |image2= |Swiss Prot = P64168 | Genbank = 888367 | PDB = | DrugBank ...)

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Current revision

Rv2151c
Name
Cell division protein FtsQ
Identifiers
Swiss Prot	P64168
Genbank	888367
PDB	?
Chemical data
Formula	C14H13NO3S [1]
Mol. wt.	33934 Da
Pharmacokinetic data
Bioavailability	?
Solubility	?
Isoelectric-Point	6.5472

Contents 1 General 1.1 Protein Sequence 2 Human Homologue Blast Result 3 Alergen Protein 4 Bacterial Toxin Prediction 5 Subcellular Location 6 Antigens 6.1 B cell Epitopes 6.1.1 BCEpred Analysis 6.1.2 ABCpred Analysis 6.1.3 IEDB Analysis 7 MHC Class-I Binder 7.1 nHLAPred Analysis 7.2 IEDB Analysis 8 MHC Class-II Binder 8.1 Propred Analysis 8.2 NetMHC-II Analysis 9 External Links

[edit] General

THIS PROTEIN MAY BE INVOLVED IN SEPTUM FORMATION. POSSIBLE CELL DIVISION PROTEIN FTSQ

Rv2151c, (MTCY270.17), len: 314 aa. Possible ftsQ, cell division protein, with some homology to FTSQ_STRGR|P45503 cell division protein ftsq homolog from Streptomyces griseus (208 aa), FASTA scores: opt: 204, E(): 4e-05; (30.6% identity in 193 aa overlap). Essential gene by Himar1-based transposon mutagenesis in H37Rv strain (see Sassetti et al., 2003) mutants available at TARGET website

[edit] Protein Sequence

>Rv2151c, TB.seq 2409698:2410639 MW:33934 MTEHNEDPQIERVADDAADEEAVTEPLATESKDEPAEHPEFEGPRRRARRERAERRAAQARATAIEQARRAAKRRARGQI VSEQNPAKPAARGVVRGLKALLATVVLAVVGIGLGLALYFTPAMSAREIVIIGIGAVSREEVLDAARVRPATPLLQIDTQ QVADRVATIRRVASARVQRQYPSALRITIVERVPVVVKDFSDGPHLFDRDGVDFATDPPPPALPYFDVDNPGPSDPTTKA ALQVLTALHPEVASQVGRIAAPSVASITLTLADGRVVIWGTTDRCEEKAEKLAALLTQPGRTYDVSSPDLPTVK

[edit] Human Homologue Blast Result

subject ids	% identity	% positives	alignment length	evalue
sp|O60266.3	30	44	59	0.97
sp|Q9Y5B9.1	31	57	61	3.8
sp|Q9UJA5.1	25	50	82	4.2
sp|Q9ULL0.3	38	58	36	5.0
sp|O15226.2	37	44	43	5.6

[edit] Alergen Protein

Link to Algpred
Non Allergen Predicted by AlgPred Server

[edit] Bacterial Toxin Prediction

Link to btxpred
No Hit Fountd by btxpred server.

[edit] Subcellular Location

Link to TBpred
Cytoplasmic

[edit] Antigens

No Hit Found in AntigenDB
No. Hit Found in IEDB

[edit] B cell Epitopes

[edit] BCEpred Analysis

Link to Bcepred
Result Predicited by [2]

[edit] ABCpred Analysis

Link to ABCpred
Result Predicited by [3]

[edit] IEDB Analysis

Link to IEDB
Result Predicited by [4]

[edit] MHC Class-I Binder

[edit] nHLAPred Analysis

Link to nHLApred
Result Predicited by [5]

[edit] IEDB Analysis

Link to IEDB
Result Predicted by [6]

[edit] MHC Class-II Binder

[edit] Propred Analysis

Link to Propred
Result Predicted by [7]

[edit] NetMHC-II Analysis

Link to NetMHC-II
Result Predicted by [8]

[edit] External Links

• Database of Mycobacterium tuberculosis genome sequences and related information.