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- Installing Bioperl for Unix |<TT>BLASTDIR</TT> || Specifies where the NCBI <TT>blastall</TT>, <TT>blastpgp</TT>, <TT>bl2seq</TT>, etc.. are located. ...17 KB (2842 words) - 10:16, 8 September 2008
- Entrez ... s at the [[National Center for Biotechnology Information]] (NCBI) website. NCBI is part of the [[United States National Library of Medicine|National Libra ... ... . Search results can be saved temporarily in a Clipboard. Users with a MyNCBI account can save queries indefinitely and also choose to have updates with ...5 KB (692 words) - 04:33, 17 August 2008
- Genomics ... on how to use BLAST, see the tutorial Sequence similarity searching using NCBI BLAST available through Gene Gateway, an online guide for learning about g ...5 KB (708 words) - 07:03, 18 August 2008
- Protein Data Bank ... ling DataBase (MMDB)] from [[National Center for Biotechnology Information|NCBI]]11 KB (1705 words) - 05:34, 19 August 2008
- Synthetic biology ... altech.edu/ Michael Elowitz's] early work on the Repressilator [http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_ui ... ... clude the pioneering work of Tim Gardner and Jim Collins on an [http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_ui ...17 KB (2568 words) - 06:47, 17 September 2008
- BLAST ... a]]. It is available on the web on [http://www.ncbi.nlm.nih.gov/BLAST/ the NCBI website]. Alternative implementations include [http://blast.wustl.edu/ WU- ... ... html SEG] program is used for protein sequences and the program [ftp://ftp.ncbi.nlm.nih.gov/pub/agarwala/windowmasker/windowmasker_suppl.pdf DUST] is used ...20 KB (3062 words) - 11:25, 19 August 2008
- FASTA format ... than one header, separated by a ^A (Control-A) character (as in [ftp://ftp.ncbi.nih.gov/blast/db/FASTA/nr.gz]). ... ese comments and follow [http://www.ncbi.nlm.nih.gov/blast/fasta.shtml the NCBI FASTA specification]. An example of a multiple sequence FASTA file follows ...13 KB (1766 words) - 11:08, 19 August 2008
- Proteomics * [[NCBI]] ... rmation resources for large protein sets. Proteomics, 8: 42-44 [http://www.ncbi.nlm.nih.gov/pubmed/18095364?ordinalpos=1&itool=EntrezSystem2.PEntrez.Pubme ...16 KB (2303 words) - 09:50, 17 September 2008
- Pharmacogenomics * [http://www.ncbi.nlm.nih.gov/About/primer/pharm.html NCBI Primer on Pharmacogenomics], a quick introduction to the promise of custom ...2 KB (269 words) - 11:36, 20 August 2008
- Ampligen ... ology, 2007 Apr 15;178(8):5200-8, abstract available online at: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=pubmed&Cmd=ShowDetailView&TermToSearch=1740430 ... ... ry.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=7893988][http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_ui ...20 KB (2874 words) - 11:26, 22 August 2008
- Molecular Visualization Tools ... structures from NCBI's Entrez ||Windows, Macintosh, and Unix|| [http://www.ncbi.nlm.nih.gov/Structure/CN3D/cn3d.shtml Download]6 KB (954 words) - 06:09, 27 August 2008
- SNP ... NP'' is a SNP database from National Center for Biotechnology Information (NCBI). ... nih.gov/About/primer/snps.html NCBI resources] - Introduction to SNPs from NCBI6 KB (930 words) - 08:53, 16 September 2008
- Installing Bioperl on Windows http://www.ncbi.nlm.nih.gov/staff/tao/URLAPI/pc_setup.html ... s. This can be accomplished using the <tt>-download</tt> flag in <tt>load_ncbi_taxonomy.pl</tt>, but it will not 'untar' the file correctly unless you ha ...27 KB (4360 words) - 10:36, 8 September 2008
- GenBank ... n (DDBJ), the European Molecular Biology Laboratory (EMBL), and GenBank at NCBI. These three organizations exchange data on a daily basis. ... lled BankIt, for convenient and quick submission of sequence data. Sequin, NCBI's stand-alone submission software for MAC, PC, and UNIX platforms, is also ...3 KB (426 words) - 04:26, 9 September 2008
- Biological Sequence Databases * [http://www.ncbi.nlm.nih.gov/Genbank/index.html GenBank(USA)] ====[http://www.ncbi.nlm.nih.gov/sites/entrez?db=unigene UniGene]====10 KB (1398 words) - 01:30, 30 October 2011
- Biological Structure Databases '''MMDB''': http://www.ncbi.nlm.nih.gov/Structure/MMDB/mmdb.shtml NCBI's structure database is called MMDB (Molecular Modeling DataBase), and it ...6 KB (821 words) - 09:48, 13 September 2008
- Guideline for creating Immunotation of Mtb 7. Go to [http://blast.ncbi.nlm.nih.gov/Blast.cgi NCBI Blast] and perform blastp against [http://uniprot.org SwissProt database] ... ... ke B cell T cell Epitopes and also get the respective literature (From the NCBI related articles find out latest information regarding epitope and immunog ...7 KB (1131 words) - 06:11, 15 January 2010
- Immunotation of Rv3459c | Genbank = NC_000962[http://www.ncbi.nlm.nih.gov/nuccore/57116681?report=genbank&log$=seqview&from=3879273&to=3 ...5 KB (667 words) - 14:13, 16 April 2010
- Thiothrix ... /Browser/wwwtax.cgi?mode=Info&id=1030&lvl=3&keep=1&srchmode=1&unlock&lin=s NCBI Taxonomy] [http://www.ncbi.nlm.nih.gov/pmc/articles/PMC106752/ Symbiotic Relationship of Thiothrix sp ...1 KB (129 words) - 07:20, 9 September 2010
- CarboDB Glucurunoxylomannan 1001 [http://www.ncbi.nlm.nih.gov/pubmed/1716613?dopt=Abstract' PubMed]3 KB (439 words) - 06:02, 8 April 2010
