Immunotation of Rv1902c

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| width=250
| width=250
|image2=
|image2=
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|Swiss Prot =   
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|Swiss Prot =  O07730
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| Genbank          =
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| Genbank          = 885057[http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&cmd=Retrieve&dopt=Graphics&list_uids=885057]
| PDB        =
| PDB        =
| DrugBank          =
| DrugBank          =
| chemical_formula  =  
| chemical_formula  =  
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| molecular_weight  =  
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| molecular_weight  = 46420.5
| solubility        =  
| solubility        =  
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|Isoelectric-Point =  
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|Isoelectric-Point = 9.87
}}
}}
=General=
=General=
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NVOLVED IN TRANSPORT OF SIALIC ACID ACROSS THE MEMBRANE. RESPONSIBLE FOR THE TRANSLOCATION OF THE SUBSTRATE ACROSS THE MEMBRANE.
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Product PROBABLE SIALIC ACID-TRANSPORT INTEGRAL MEMBRANE PROTEIN NANT
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==Protein Sequence==
>Rv1902c, TB.seq  2149007:2150272 MW:46422  
>Rv1902c, TB.seq  2149007:2150272 MW:46422  
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VAAPRLTGDQRNAFMASFLGWTMDAFDYFLVVLVYADIATTFHHTKTDVAFLTTATLAMRPVGALLFGLWADRVGRRVPL
VAAPRLTGDQRNAFMASFLGWTMDAFDYFLVVLVYADIATTFHHTKTDVAFLTTATLAMRPVGALLFGLWADRVGRRVPL
MVDVSFYSVIGFLCAFAPNFTVLVILRLLYGIGMGGEWGLGAALSMEKVPAERRGVFSGLLQEGYAFGYLLASVAALVVM
MVDVSFYSVIGFLCAFAPNFTVLVILRLLYGIGMGGEWGLGAALSMEKVPAERRGVFSGLLQEGYAFGYLLASVAALVVM
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LMQVFVQGAWGVIPAHLTEMSPDAIRGVYPGVTYQLGNLLAAFNLPIQERLAESHGYPFALAATIVPVLLVVAVLTAIGK
LMQVFVQGAWGVIPAHLTEMSPDAIRGVYPGVTYQLGNLLAAFNLPIQERLAESHGYPFALAATIVPVLLVVAVLTAIGK
DATGIRFGTTETAFLVRHRNRH
DATGIRFGTTETAFLVRHRNRH
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=Human Homologue Blast Result=
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No significant similarity found in blastp against Nr swissprot database against this entry.
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=Alergen Protein=
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Link to [http://www.imtech.res.in/raghava/algpred/ Algpred]<br>
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Non Allergen Predicted by AlgPred Server
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=Bacterial Toxin Prediction=
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Link to [http://www.imtech.res.in/raghava/btxpred/submission.html btxpred]<br>
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No Hit Fountd by btxpred server.
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=Subcellular Location=
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Link to [http://www.imtech.res.in/raghava/tbpred/ TBpred]<br>
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integral membrane protein
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=Antigens=
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No Hit Found in [http://www.imtech.res.in/raghava/antigendb/keyquery.html AntigenDB]<br>
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No. Hit Found in [http://www.iedb.org/ IEDB]
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==B cell Epitopes==
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====BCEpred Analysis====
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Link to [http://www.imtech.res.in/raghava/bcepred/bcepred_submission.html Bcepred] 
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Result Predicited by [http://crdd.osdd.net/drugpedia/index.php/Image:BcePred_Prediction_Server1902c.doc]
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====ABCpred Analysis====
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Link to [http://www.imtech.res.in/raghava/abcpred/ABC_submission.html ABCpred]<br>
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Result Predicited by[http://crdd.osdd.net/drugpedia/index.php/Image:AbcPred1902c.doc]
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====IEDB Analysis====
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Link to [http://tools.immuneepitope.org/tools/bcell/iedb_input IEDB]<br>
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Result Predicited by [http://crdd.osdd.net/drugpedia/index.php/Image:IEDB_analysis_1902c.doc]
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=MHC Class-I Binder=
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==nHLAPred Analysis==
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Link to [http://www.imtech.res.in/raghava/nhlapred/comp.html nHLApred]
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<br>
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Result Predicited by [http://crdd.osdd.net/drugpedia/index.php/Image:NHLAPred1902c.doc]
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==IEDB Analysis==
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Link to [http://tools.immuneepitope.org/analyze/html/mhc_processing.html IEDB] <br>
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Result Predicted by [http://crdd.osdd.net/drugpedia/index.php/Image:IEDB1902c.doc]
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=MHC Class-II Binder=
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==Propred Analysis==
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Link to [http://www.imtech.res.in/raghava/propred/ Propred]<br>
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Result Predicted by[http://crdd.osdd.net/drugpedia/index.php/Image:Prophred1902c.doc]
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==NetMHC-II Analysis==
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Link to [http://www.cbs.dtu.dk/services/NetMHCII/ NetMHC-II]<br>
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Result Predicted by[http://crdd.osdd.net/drugpedia/index.php/Image:NetmhcII01902c1.doc]
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=External Links=
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* [http://www.biohealthbase.org/mycobacterium Database] of ''Mycobacterium tuberculosis'' genome sequences and related information.
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[[Category:C2D]]
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[[Category:Mtb Immunotation]]

Current revision

Immunotation of Rv1902c
Name
Dihydrodipicolinate Synthase
Identifiers
Swiss Prot O07730
Genbank [http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&cmd=Retrieve&dopt=Graphics&list_uids=885057 885057[1]]
PDB  ?
Chemical data
Formula  ?
Mol. wt. 46420.5
Pharmacokinetic data
Bioavailability  ?
Solubility  ?
Isoelectric-Point 9.87

Contents

[edit] General

NVOLVED IN TRANSPORT OF SIALIC ACID ACROSS THE MEMBRANE. RESPONSIBLE FOR THE TRANSLOCATION OF THE SUBSTRATE ACROSS THE MEMBRANE. Product PROBABLE SIALIC ACID-TRANSPORT INTEGRAL MEMBRANE PROTEIN NANT


[edit] Protein Sequence

>Rv1902c, TB.seq 2149007:2150272 MW:46422


VAAPRLTGDQRNAFMASFLGWTMDAFDYFLVVLVYADIATTFHHTKTDVAFLTTATLAMRPVGALLFGLWADRVGRRVPL MVDVSFYSVIGFLCAFAPNFTVLVILRLLYGIGMGGEWGLGAALSMEKVPAERRGVFSGLLQEGYAFGYLLASVAALVVM NWLGLSWRWLFGLSIIPALISLIIRYRVKESEVWEAAQDRMRLTKTRIRDVLGNPAIVRRFVYLVLLMTAFNWMSHGTQD VYPTFLTATTDHGAGLSSLTARWIVVIYNIGAIIGGLAFGTLSQRFSRRYTIVFCAALGLPIVPLFAYSRTAAMLCLGSF LMQVFVQGAWGVIPAHLTEMSPDAIRGVYPGVTYQLGNLLAAFNLPIQERLAESHGYPFALAATIVPVLLVVAVLTAIGK DATGIRFGTTETAFLVRHRNRH

[edit] Human Homologue Blast Result

No significant similarity found in blastp against Nr swissprot database against this entry.

[edit] Alergen Protein

Link to Algpred
Non Allergen Predicted by AlgPred Server

[edit] Bacterial Toxin Prediction

Link to btxpred
No Hit Fountd by btxpred server.

[edit] Subcellular Location

Link to TBpred
integral membrane protein

[edit] Antigens

No Hit Found in AntigenDB
No. Hit Found in IEDB

[edit] B cell Epitopes

[edit] BCEpred Analysis

Link to Bcepred Result Predicited by [2]

[edit] ABCpred Analysis

Link to ABCpred
Result Predicited by[3]

[edit] IEDB Analysis

Link to IEDB
Result Predicited by [4]

[edit] MHC Class-I Binder

[edit] nHLAPred Analysis

Link to nHLApred
Result Predicited by [5]

[edit] IEDB Analysis

Link to IEDB
Result Predicted by [6]

[edit] MHC Class-II Binder

[edit] Propred Analysis

Link to Propred
Result Predicted by[7]

[edit] NetMHC-II Analysis

Link to NetMHC-II
Result Predicted by[8]

[edit] External Links

  • Database of Mycobacterium tuberculosis genome sequences and related information.